Super-resolution neural networks improve the spatiotemporal resolution of adaptive MRI-guided radiation therapy.

BACKGROUND: Magnetic resonance imaging (MRI) offers superb non-invasive, soft tissue imaging of the human body. However, extensive data sampling requirements severely restrict the spatiotemporal resolution achievable with MRI. This limits the modality's utility in real-time guidance applications, particularly for the rapidly growing MRI-guided radiation therapy approach to cancer treatment. Recent advances in artificial intelligence (AI) could reduce the trade-off between the spatial and the temporal resolution of MRI, thus increasing the clinical utility of the imaging modality. METHODS: We trained deep learning-based super-resolution neural networks to increase the spatial resolution of real-time MRI. We developed a framework to integrate neural networks directly onto a 1.0 T MRI-linac enabling real-time super-resolution imaging. We integrated this framework with the targeting system of the MRI-linac to demonstrate real-time beam adaptation with super-resolution-based imaging. We tested the integrated system using large publicly available datasets, healthy volunteer imaging, phantom imaging, and beam tracking experiments using bicubic interpolation as a baseline comparison. RESULTS: Deep learning-based super-resolution increases the spatial resolution of real-time MRI across a variety of experiments, offering measured performance benefits compared to bicubic interpolation. The temporal resolution is not compromised as measured by a real-time adaptation latency experiment. These two effects, an increase in the spatial resolution with a negligible decrease in the temporal resolution, leads to a net increase in the spatiotemporal resolution. CONCLUSIONS: Deployed super-resolution neural networks can increase the spatiotemporal resolution of real-time MRI. This has applications to domains such as MRI-guided radiation therapy and interventional procedures.

Magnetic resonance imaging (MRI) is a medical imaging modality that is used to image organs such as the brain, lungs, and liver as well as diseases such as cancer. MRI scans taken at high resolution are of overly long duration. This time constraint limits the accuracy of MRI-guided cancer radiation therapy, where imaging must be fast to adapt treatment to tumour motion. Here, we deployed artificial intelligence (AI) models to achieve fast and high detail MRI. We additionally validated our AI models across various scenarios. These AI-based models could potentially enable people with cancer to be treated with higher accuracy and precision.

Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networks.

Quantitative susceptibility mapping (QSM) is a post-processing technique for deriving tissue magnetic susceptibility distribution from MRI phase measurements. Deep learning (DL) algorithms hold great potential for solving the ill-posed QSM reconstruction problem. However, a significant challenge facing current DL-QSM approaches is their limited adaptability to magnetic dipole field orientation variations during training and testing. In this work, we propose a novel Orientation-Adaptive Latent Feature Editing (OA-LFE) module to learn the encoding of acquisition orientation vectors and seamlessly integrate them into the latent features of deep networks. Importantly, it can be directly Plug-and-Play (PnP) into various existing DL-QSM architectures, enabling reconstructions of QSM from arbitrary magnetic dipole orientations. Its effectiveness is demonstrated by combining the OA-LFE module into our previously proposed phase-to-susceptibility single-step instant QSM (iQSM) network, which was initially tailored for pure-axial acquisitions. The proposed OA-LFE-empowered iQSM, which we refer to as iQSM+, is trained in a simulated-supervised manner on a specially-designed simulation brain dataset. Comprehensive experiments are conducted on simulated and in vivo human brain datasets, encompassing subjects ranging from healthy individuals to those with pathological conditions. These experiments involve various MRI platforms (3T and 7T) and aim to compare our proposed iQSM+ against several established QSM reconstruction frameworks, including the original iQSM. The iQSM+ yields QSM images with significantly improved accuracies and mitigates artifacts, surpassing other state-of-the-art DL-QSM algorithms. The PnP OA-LFE module's versatility was further demonstrated by its successful application to xQSM, a distinct DL-QSM network for dipole inversion. In conclusion, this work introduces a new DL paradigm, allowing researchers to develop innovative QSM methods without requiring a complete overhaul of their existing architectures.

Distortion-corrected image reconstruction with deep learning on an MRI-Linac.

PURPOSE: MRI is increasingly utilized for image-guided radiotherapy due to its outstanding soft-tissue contrast and lack of ionizing radiation. However, geometric distortions caused by gradient nonlinearities (GNLs) limit anatomical accuracy, potentially compromising the quality of tumor treatments. In addition, slow MR acquisition and reconstruction limit the potential for effective image guidance. Here, we demonstrate a deep learning-based method that rapidly reconstructs distortion-corrected images from raw k-space data for MR-guided radiotherapy applications. METHODS: We leverage recent advances in interpretable unrolling networks to develop a Distortion-Corrected Reconstruction Network (DCReconNet) that applies convolutional neural networks (CNNs) to learn effective regularizations and nonuniform fast Fourier transforms for GNL-encoding. DCReconNet was trained on a public MR brain dataset from 11 healthy volunteers for fully sampled and accelerated techniques, including parallel imaging (PI) and compressed sensing (CS). The performance of DCReconNet was tested on phantom, brain, pelvis, and lung images acquired on a 1.0T MRI-Linac. The DCReconNet, CS-, PI-and UNet-based reconstructed image quality was measured by structural similarity (SSIM) and RMS error (RMSE) for numerical comparisons. The computation time and residual distortion for each method were also reported. RESULTS: Imaging results demonstrated that DCReconNet better preserves image structures compared to CS- and PI-based reconstruction methods. DCReconNet resulted in the highest SSIM (0.95 median value) and lowest RMSE (<0.04) on simulated brain images with four times acceleration. DCReconNet is over 10-times faster than iterative, regularized reconstruction methods. CONCLUSIONS: DCReconNet provides fast and geometrically accurate image reconstruction and has the potential for MRI-guided radiotherapy applications.

Rapid distortion correction enables accurate magnetic resonance imaging-guided real-time adaptive radiotherapy.

Background and purpose: Magnetic resonance imaging (MRI)-Linac systems combine simultaneous MRI with radiation delivery, allowing treatments to be guided by anatomically detailed, real-time images. However, MRI can be degraded by geometric distortions that cause uncertainty between imaged and actual anatomy. In this work, we develop and integrate a real-time distortion correction method that enables accurate real-time adaptive radiotherapy. Materials and methods: The method was based on the pre-treatment calculation of distortion and the rapid correction of intrafraction images. A motion phantom was set up in an MRI-Linac at isocentre (P0 ), the edge (P 1) and just outside (P 2) the imaging volume. The target was irradiated and tracked during real-time adaptive radiotherapy with and without the distortion correction. The geometric tracking error and latency were derived from the measurements of the beam and target positions in the EPID images. Results: Without distortion correction, the mean geometric tracking error was 1.3 mm at P 1 and 3.1 mm at P 2. When distortion correction was applied, the error was reduced to 1.0 mm at P 1 and 1.1 mm at P 2. The corrected error was similar to an error of 0.9 mm at P0 where the target was unaffected by distortion indicating that this method has accurately accounted for distortion during tracking. The latency was 319 ± 12 ms without distortion correction and 335 ± 34 ms with distortion correction. Conclusions: We have demonstrated a real-time distortion correction method that maintains accurate radiation delivery to the target, even at treatment locations with large distortion.

Integrated MRI-guided radiotherapy - opportunities and challenges.

MRI can help to categorize tissues as malignant or non-malignant both anatomically and functionally, with a high level of spatial and temporal resolution. This non-invasive imaging modality has been integrated with radiotherapy in devices that can differentially target the most aggressive and resistant regions of tumours. The past decade has seen the clinical deployment of treatment devices that combine imaging with targeted irradiation, making the aspiration of integrated MRI-guided radiotherapy (MRIgRT) a reality. The two main clinical drivers for the adoption of MRIgRT are the ability to image anatomical changes that occur before and during treatment in order to adapt the treatment approach, and to image and target the biological features of each tumour. Using motion management and biological targeting, the radiation dose delivered to the tumour can be adjusted during treatment to improve the probability of tumour control, while simultaneously reducing the radiation delivered to non-malignant tissues, thereby reducing the risk of treatment-related toxicities. The benefits of this approach are expected to increase survival and quality of life. In this Review, we describe the current state of MRIgRT, and the opportunities and challenges of this new radiotherapy approach.

Effect of the labour roadmap on anxiety, labour pain, sense of control, and gestational outcomes in primiparas.

BACKGROUND AND PURPOSE: The pain and uncertainty of the labour process can lead to anxiety. Birth ball exercises are one of the pain relief methods for the labour process. This study aimed to explore the outcomes of the use of the labour roadmap with birth balls in primiparas. MATERIALS AND METHODS: This randomized controlled trial involved Chinese women between the gestational ages of 37-42 weeks who were randomly assigned to the experimental or control group. The outcomes of labour pain, anxiety, and self-control were collected using the Short-Form McGill Pain Questionnaire, visual analogue scale-anxiety, and Labor Agentry Scale, respectively. RESULTS: The study found improvements in anxiety, pain, and self-control (P < 0.05), as well as the duration of the first stage of labour (P < 0.05) in the intervention group, but there were no significant differences in the duration of the second and third stages of labour, volume of bleeding, or the 1-min Apgar score between the two groups (P = 0.09, 0.07, 0.06, 0.63, respectively). CONCLUSION: The labour roadmap was effective for improving self-control, reducing pain and anxiety during labour, and accelerating the first stage of labour.

ReUINet: A fast GNL distortion correction approach on a 1.0 T MRI-Linac scanner.

PURPOSE: The hybrid system combining a magnetic resonance imaging (MRI) scanner with a linear accelerator (Linac) has become increasingly desirable for tumor treatment because of excellent soft tissue contrast and nonionizing radiation. However, image distortions caused by gradient nonlinearity (GNL) can have detrimental impacts on real-time radiotherapy using MRI-Linac systems, where accurate geometric information of tumors is essential. METHODS: In this work, we proposed a deep convolutional neural network-based method to efficiently recover undistorted images (ReUINet) for real-time image guidance. The ReUINet, based on the encoder-decoder structure, was created to learn the relationship between the undistorted images and distorted images. The ReUINet was pretrained and tested on a publically available brain MR image dataset acquired from 23 volunteers. Then, transfer learning was adopted to implement the pretrained model (i.e., network with optimal weights) on the experimental three-dimensional (3D) grid phantom and in-vivo pelvis image datasets acquired from the 1.0 T Australian MRI-Linac system. RESULTS: Evaluations on the phantom (768 slices) and pelvis data (88 slices) showed that the ReUINet achieved improvement over 15 times and 45 times on computational efficiency in comparison with standard interpolation and GNL-encoding methods, respectively. Moreover, qualitative and quantitative results demonstrated that the ReUINet provided better correction results than the standard interpolation method, and comparable performance compared to the GNL-encoding approach. CONCLUSIONS: Validated by simulation and experimental results, the proposed ReUINet showed promise in obtaining accurate MR images for the implementation of real-time MRI-guided radiotherapy.

Fast geometric distortion correction using a deep neural network: Implementation for the 1 Tesla MRI-Linac system.

PURPOSE: Combining high-resolution magnetic resonance imaging (MRI) with a linear accelerator (Linac) as a single MRI-Linac system provides the capability to monitor intra-fractional motion and anatomical changes during radiotherapy, which facilitates more accurate delivery of radiation dose to the tumor and less exposure to healthy tissue. The gradient nonlinearity (GNL)-induced distortions in MRI, however, hinder the implementation of MRI-Linac system in image-guided radiotherapy where highly accurate geometry and anatomy of the target tumor is indispensable. METHODS: To correct the geometric distortions in MR images, in particular, for the 1 Tesla (T) MRI-Linac system, a deep fully connected neural network was proposed to automatically learn the intricate relationship between the undistorted (theoretical) and distorted (real) space. A dataset, consisting of spatial samples acquired by phantom measurement that covers both inside and outside the working diameter of spherical volume (DSV), was utilized for training the neural network, which offers the ability to describe subtle deviations of the GNL field within the entire region of interest (ROI). RESULTS: The performance of the proposed method was evaluated on MR images of a three-dimensional (3D) phantom and the pelvic region of an adult volunteer scanned in the 1T MRI-Linac system. The experimental results showed that the severe geometric distortions within the entire ROI had been successfully corrected with an error less than the pixel size. Also, the presented network is highly efficient, which achieved significant improvement in terms of computational efficiency compared to existing methods. CONCLUSIONS: The feasibility of the presented deep neural network for characterizing the GNL field deviations in the 1T MRI-Linac system was demonstrated in this study, which shows promise in facilitating the MRI-Linac system to be routinely implemented in real-time MRI-guided radiotherapy.

Innate Immune Signaling Contributes to Tubular Cell Senescence in the Glis2 Knockout Mouse Model of Nephronophthisis.

Nephronophthisis (NPHP), the leading genetic cause of end-stage renal failure in children and young adults, is a group of autosomal recessive diseases characterized by kidney-cyst degeneration and fibrosis for which no therapy is currently available. To date, mutations in >25 genes have been identified as causes of this disease that, in several cases, result in chronic DNA damage in kidney tubular cells. Among such mutations, those in the transcription factor-encoding GLIS2 cause NPHP type 7. Loss of function of mouse Glis2 causes senescence of kidney tubular cells. Senescent cells secrete proinflammatory molecules that induce progressive organ damage through several pathways, among which NF-κB signaling is prevalent. Herein, we show that the NF-κB signaling is active in Glis2 knockout kidney epithelial cells and that genetic inactivation of the toll-like receptor (TLR)/IL-1 receptor or pharmacologic elimination of senescent cells (senolytic therapy) reduces tubule damage, fibrosis, and apoptosis in the Glis2 mouse model of NPHP. Notably, in Glis2, Tlr2 double knockouts, senescence was also reduced and proliferation was increased, suggesting that loss of TLR2 activity improves the regenerative potential of tubular cells in Glis2 knockout kidneys. Our results further suggest that a combination of TLR/IL-1 receptor inhibition and senolytic therapy may delay the progression of kidney disease in NPHP type 7 and other forms of this disease.

Geometric distortion characterization and correction for the 1.0 T Australian MRI-linac system using an inverse electromagnetic method.

PURPOSE: The magnetic resonance imaging (MRI)-Linac system combines a MRI scanner and a linear accelerator (Linac) to realize real-time localization and adaptive radiotherapy for tumors. Given that the Australian MRI-Linac system has a 30-cm diameter of spherical volume (DSV) with a shimmed homogeneity of ±4.05 parts per million (ppm), a gradient nonlinearity (GNL) of <5% can only be assured within 15 cm from the system's isocenter. GNL increases from the isocenter and escalates close to and outside of the edge of the DSV. Gradient nonlinearity can cause large geometric distortions, which may provide inaccurate tumor localization and potentially degrade the radiotherapy treatment. In this study, we aimed to characterize and correct the geometric distortions both inside and outside of the DSV. METHODS: On the basis of phantom measurements, an inverse electromagnetic (EM) method was developed to reconstitute the virtual current density distribution that could generate gradient fields. The obtained virtual EM source was capable of characterizing the GNL field both inside and outside of the DSV. With the use of this GNL field information, our recently developed "GNL-encoding" reconstruction method was applied to correct the distortions implemented in the k-space domain. RESULTS: Both phantom and in vivo human images were used to validate the proposed method. The results showed that the maximal displacements within an imaging volume of 30 cm × 30 cm × 30 cm after using the fifth-order spherical harmonic (SH) method and the proposed method were 6.1 ± 0.6 mm and 1.8 ± 0.6 mm, respectively. Compared with the fifth-order SH-based method, the new solution decreased the percentage of markers (within an imaging volume of 30 cm × 30 cm × 30 cm) with ≥1.5-mm distortions from 6.3% to 1.3%, indicating substantially improved geometric accuracy. CONCLUSIONS: The experimental results indicated that the proposed method could provide substantially improved geometric accuracy for the region outside of the DSV, when comparing with the fifth-order SH-based method.

Gradient Field Deviation (GFD) Correction Using a Hybrid-Norm Approach With Wavelet Sub-Band Dependent Regularization: Implementation for Radial MRI at 9.4 T.

In magnetic resonance imaging (MRI), system imperfections and eddy currents can cause gradient field deviation (GFD), leading to various image distortions, such as increased noise, ghosting artifacts, and geometric deformation. These distortions can degrade the clinical value of MR images. Generally, non-Cartesian image sequences, such as radial sampling, produce larger gradient deviations than Cartesian sampling, as a result of stronger eddy current-induced gradient delays and phase errors. In this paper, we developed a GFD encoding method to reduce image noise and artifacts for radial MRI. In the proposed method, a hybrid norm (combination of L2 and L1 norms) optimization problem was formed, which incorporated a wavelet sub-band adaptive regularization mechanism. The new approach seeks a regularized solution not only offering corrected images with reduced artifacts and geometric deformation, but also good preservation of anatomical structural details. The new method was evaluated with simulation and experiment at 9.4 T MRI. The results demonstrated that the proposed method can provide over 50% noise reduction and 15% artifact reduction compared with the traditional regridding method, suggesting substantially reduced GFD-induced distortions and improved image quality.